Cumulative Title Index

Abstract

Metal fractionation is a powerful tool for studying the mobility, bioavailability and toxicity of metals in sediments and soils. A seven-step sequential extraction technique was used to determine the potential mobility of selected heavy metals (Fe, Mn, Zn, Cu, Pb, Cd and Ni) in the sediments of Lake Naivasha. Results indicate that residual fraction was the most important phase for the elements Fe, Mn, Cu and Zn. However, Pb and Cd are highly enriched in the non-residual phases. Nickel on the other hand was distributed evenly between the non-residual and the residual fractions.

The total concentrations of the heavy metals suggested a decreasing order of iron ?> manganese ? zinc > nickel > copper ? lead > cadmium. However, the detailed sequential extraction data indicated an order of release or mobility of cadmium > lead ? nickel ? zinc > manganese > copper > iron. The high percentage of Cd and Pb in the mobile fractions suggests high bioavailability of these two elements in the study area and maybe a pointer to anthropogenic input of the two elements in the study area.     

Distribution of heavy metals and their chemical speciation in sediments from the Abelardo L. Rodríguez Dam,Sonora, México

Abstract

The purpose of this study was to investigate the distribution of total and bioavailable metals (Cd, Cu, Cr, Fe, Mn, Pb and Zn) in sediments of the Abelardo L. Rodríguez (ALR) dam located in the eastern part of the city of Hermosillo, Sonora, Mexico. Seventy two sediment samples were collected in 2009 during four sampling campaigns in February (spring), May (summer), September (end of summer) and December (winter) in five different areas within the dam surface (Zones I, II, III, IV and V), including the Gate Station. Determination of heavy metals was carried out by flame atomic absorption spectrophotometry (FAAS). The results indicate high levels of total heavy metals in the following order: Fe>Mn>Zn>Pb>Cu>Cr>Cd. This is indicative of the impact of human activities located in areas surrounding the reservoir, specifically urban and industrial. The distribution and state of accumulation of trace metals in the sediment is largely dominated by the residual and Fe/Mn oxides geochemical phases. Fraction I (exchangeable) also presented high concentrations of metals (Cu, Fe, Mn and Zn). From enrichment factor analysis, the study area is prevalently enriched in Cd, Cu and Pb in Zones I, II, III, IV and Gate Station. This indicates that the sediments are impacted by anthropogenic activities such as downloads, domestic and industrial wastewater. Geoaccumulation index (Igeo) indicates that Zones I, II, III, IV and V (including Gate Station) do not show contamination by Cr, Fe, Mn and Zn. However, there is a moderate to heavy contamination by Cd, Cu and Pb (Igeo: 2–4) in all areas of study. The comparison between the results obtained with the sediment quality criteria (LEL and SEL), indicate that Zones I, II, III, IV, V and Gate Station, are contaminated with Cd, Cu and Pb, and severely contaminated by Fe.

The elevated levels of heavy metals detected in the sediment of the ALR Dam require special attention, since in the exchangeable fraction, the metals are specifically adsorbed on the sediment and can be released when the ionic composition of water changes. However, additional studies are required in this reservoir on the chemistry and toxicology of metals for a full assessment of potential risks posed to biota and man.     

Structure and content of pollutants in temporal surface sediments in small watersheds

ABSTRACT

Formation of gel-like surface sediments has been observed during spring and autumn in small watersheds in boreal areas with pH <5.7 and concentrations of humic substances above 3 mg L^?1. This structure efficiently accumulates dissolved, colloidal and particulate constituents. The gel consists of ferric (hydr)oxides and fulvic acid and has high viable counts of bacteria (notably Gallionella spp.) as well as fungal hyphae. The solid/solution distribution (log K_d; l kg^?1) for trace metals (Cd, Cu, Pb, V, Zn) ranges from 4 to 6.5 which indicate an efficient accumulation during periods with gel. The concentrations of adsorbable organic halogens in the gel were not different from forest soils in general.     

Determination of nitrite in lake sediments

Abstract

An evaluation of nitrite determination in marine lake sediments has shown that spectrophotometric measurements can be in error due to light scattering by colloidal (<0.2 μm) matter in extract solutions and incomplete nitrite recovery. The scatter error can be minimised by using uncoloured extract in the reference beam but precision at low levels remains poor (RSD 25 to 100%). Recovery tests on ‘spiked’ sediment indicated that optimum retrieval (～85%) occurred with 30 minute mixing with 0.2 M NH₄Cl, using a sediment to extractant ratio of 1:30. To counter this variable, calibration based on standard addition to sample suspensions is recommended. Modified procedure proposed is suitable for measuring up to 10 μg g^?1 of nitrite N; the lake sediments tested contained <100 ng g^?1     

2-Ethyl-3-methylmaleimide in Tokyo Bay Sediments Providing the First Evidence for its Formation from Chlorophylls in the Present Photic and Oxygenic Zone

Tokyo Bay bottom sediments were analyzed for 2-ethyl-3-methylmaleimide, a degradation product of chlorophylls, which has been detected in ancient sediments. It was found in all sediments examined in concentrations of about 1 to 15 nmol/g- of dried sediment, and it was shown to be preserved for 100 years in the sediments. Its depth distribution agreed with that of the reported total organic carbon content of the sediments, reflecting a change in primary productivity. We concluded that this maleimide was produced under photic and oxygenic conditions in nature before the incorporation of photosynthesizing organisms into sediments.     

Biostimulation induces syntrophic interactions that impact C,S and N cycling in a sediment microbial community

Stimulation of subsurface microorganisms to induce reductive immobilization of metals is a promising approach for bioremediation, yet the overall microbial community response is typically poorly understood. Here we used proteogenomics to test the hypothesis that excess input of acetate activates complex community functioning and syntrophic interactions among autotrophs and heterotrophs. A flow-through sediment column was incubated in a groundwater well of an acetate-amended aquifer and recovered during microbial sulfate reduction. De novo reconstruction of community sequences yielded near-complete genomes of Desulfobacter (Deltaproteobacteria), Sulfurovum- and Sulfurimonas-like Epsilonproteobacteria and Bacteroidetes. Partial genomes were obtained for Clostridiales (Firmicutes) and Desulfuromonadales-like Deltaproteobacteria. The majority of proteins identified by mass spectrometry corresponded to Desulfobacter-like species, and demonstrate the role of this organism in sulfate reduction (Dsr and APS), nitrogen fixation and acetate oxidation to CO₂ during amendment. Results indicate less abundant Desulfuromonadales, and possibly Bacteroidetes, also actively contributed to CO₂ production via the tricarboxylic acid (TCA) cycle. Proteomic data indicate that sulfide was partially re-oxidized by Epsilonproteobacteria through nitrate-dependent sulfide oxidation (using Nap, Nir, Nos, SQR and Sox), with CO₂ fixed using the reverse TCA cycle. We infer that high acetate concentrations, aimed at stimulating anaerobic heterotrophy, led to the co-enrichment of, and carbon fixation in Epsilonproteobacteria. Results give an insight into ecosystem behavior following addition of simple organic carbon to the subsurface, and demonstrate a range of biological processes and community interactions were stimulated.     

Subtidal macrozoobenthic community resilience to change following natural mouth breaching of the temporarily open/closed East Kleinemonde Estuary,South Africa

The East Kleinemonde Estuary, on the south-east coast of South Africa, typically opens for only short periods, usually <10 days. During a nine-month study in 2006, marine influence persisted for a near-continuous period of three months. This provided an opportunity to explore potential changes in the structure and pattern of the subtidal estuarine macrozoobenthic community. Salinity changes were minimal after mouth opening, decreasing by c. 4 and 8 in the lower and upper estuary, respectively. Salinity decrease was due to river dominance over tidal influence. Two biotic assemblages, structured by sediment characteristics, typified the community throughout the study: a sand-associated group near the mouth and a mud-associated group upstream. Amphipods were proportionally the most abundant group within each assemblage and on each sampling occasion. At the species level, high variability typified the community, with no trends or patterns observed. However, species richness declined from 27–30 to 23 after mouth opening. The number of species returned to former levels at the time of the final survey and just before final mouth closure. An analysis of the subtidal macrozoobenthos in the East Kleinemonde and other temporarily open/closed estuaries (TOCEs) of similar size in the bioregion indicated that communities were typically composed of relatively few, broadly tolerant euryhaline species with no species unique to TOCEs.     

The effect of seasonality upon the development of lotic biofilms and microbial biostabilisation

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Multiple-stressor effects on stream invertebrates: DNA barcoding reveals contrasting responses of cryptic mayfly species

Most freshwater ecosystems are subject to multiple anthropogenic stressors, which commonly reduce biodiversity across all levels. Existing freshwater bioassessment programmes aim at identifying responses of aquatic biota to stressors. For practical reasons, higher-level taxonomic groups (e.g. genus or family) are often used in these programmes. This approach, however, may bias assessment results as different species can differ substantially in their biological traits, thus emphasising the need for species-level data. DNA barcoding can reliably generate species-level data for animals by sequencing a fragment of the mitochondrial cytochrome c oxidase subunit I gene (COI). This allows investigating species-specific responses to environmental stressors. In this study, we sampled 43 stream sites in southern New Zealand spanning wide gradients of agricultural stressors (fine sediment and nutrient levels). We first used conventional morphological assessment to determine stream invertebrate responses to the stressors, focusing on two important indicator taxa, the mayfly Deleatidium and the snail Potamopyrgus. We then tested for the presence of cryptic species in Deleatidium and Potamopyrgus using DNA barcoding of the COI gene for 520 and 305 specimens, respectively. While all Potamopyrgus specimens belonged to a single species, Deleatidium consisted of 12 distinct molecularly identified clades that likely represent distinct species. Finally, we compared stressor responses assessed at genus and species level. While overall Deleatidium abundance was unrelated to stressor levels, some of the individual clades differed clearly in the magnitude and direction of their responses to nutrient and sediment stress. While the most abundant cryptic Deleatidium clade (clade 1) showed no relationship to sediment or nutrient levels, clades 2 and 3 responded negatively to nutrient or sediment increases, respectively. These contrasting patterns indicate that individual freshwater invertebrate species, often merged to a higher taxonomic level for biomonitoring purposes, can differ substantially in their tolerance to stressors and respond in more complex ways than observed at genus level. Overall, our results highlight the considerable potential and importance of including DNA barcoding into freshwater ecosystem assessment and biomonitoring programmes.